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VCF File Validation

Software & Tools

Originally published 2024-02-26. Original article. Historical wording retained.

This script was bourne of necessity to validate VCF files for injestion into Congenica. The platform does it’s own validation but the output in case of error is not human-friendly. This directs the user to which line in the VCF file might be at fault.

View the VCF File Validation repository on GitHub